Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCA1O95477 HCG4P8-203ENST00000443049 980 ntBASIC16.2■□□□□ 0.18
ABCA1O95477 AC009947.2-201ENST00000444014 672 ntBASIC16.2■□□□□ 0.18
ABCA1O95477 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.2■□□□□ 0.18
ABCA1O95477 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCA1O95477 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCA1O95477 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCA1O95477 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCA1O95477 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCA1O95477 AC018553.1-201ENST00000616682 1458 ntBASIC16.2■□□□□ 0.18
ABCA1O95477 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.19■□□□□ 0.18
ABCA1O95477 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 AC073130.3-201ENST00000624389 2278 ntBASIC16.19■□□□□ 0.18
ABCA1O95477 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 AC011558.1-201ENST00000623459 338 ntBASIC16.19■□□□□ 0.18
ABCA1O95477 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.19■□□□□ 0.18
ABCA1O95477 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCA1O95477 AFG3L1P-217ENST00000557444 2447 ntBASIC16.19■□□□□ 0.18
ABCA1O95477 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ABCA1O95477 KRT8P17-201ENST00000453110 1448 ntBASIC16.19■□□□□ 0.18
ABCA1O95477 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ABCA1O95477 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCA1O95477 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCA1O95477 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCA1O95477 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 AC128688.1-201ENST00000487626 519 ntBASIC16.18■□□□□ 0.18
ABCA1O95477 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCA1O95477 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCA1O95477 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCA1O95477 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCA1O95477 RCC2P6-201ENST00000526625 1557 ntBASIC16.18■□□□□ 0.18
ABCA1O95477 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCA1O95477 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCA1O95477 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 SLC25A24-204ENST00000569674 2357 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ABCA1O95477 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 HLA-G-202ENST00000376815 851 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 HLA-G-203ENST00000376818 1127 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.17■□□□□ 0.18
ABCA1O95477 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 AL359075.1-203ENST00000462729 1002 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
ABCA1O95477 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 AC139887.4-201ENST00000607877 719 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ABCA1O95477 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCA1O95477 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
ABCA1O95477 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
ABCA1O95477 AL049796.1-201ENST00000565336 1766 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ABCA1O95477 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 TSPY5P-201ENST00000426936 936 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCA1O95477 AL121956.5-201ENST00000625261 221 ntBASIC16.17■□□□□ 0.18
ABCA1O95477 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCA1O95477 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms