Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
TRIM13O60858 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM13O60858 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM13O60858 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM13O60858 AL390719.1-204ENST00000412397 1219 ntBASIC19.03■□□□□ 0.64
TRIM13O60858 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM13O60858 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM13O60858 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM13O60858 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM13O60858 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM13O60858 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM13O60858 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM13O60858 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM13O60858 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM13O60858 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM13O60858 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM13O60858 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM13O60858 AC073210.2-201ENST00000430369 194 ntBASIC19.02■□□□□ 0.64
TRIM13O60858 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM13O60858 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM13O60858 AC133552.2-202ENST00000575694 574 ntBASIC19.02■□□□□ 0.64
TRIM13O60858 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM13O60858 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM13O60858 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM13O60858 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM13O60858 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM13O60858 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM13O60858 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM13O60858 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.02■□□□□ 0.63
TRIM13O60858 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM13O60858 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM13O60858 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM13O60858 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 AC104581.1-202ENST00000635932 2618 ntBASIC19.01■□□□□ 0.63
TRIM13O60858 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM13O60858 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19■□□□□ 0.63
TRIM13O60858 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM13O60858 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM13O60858 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM13O60858 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM13O60858 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19■□□□□ 0.63
TRIM13O60858 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19■□□□□ 0.63
TRIM13O60858 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 AL031598.1-201ENST00000561511 1773 ntBASIC19■□□□□ 0.63
TRIM13O60858 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19■□□□□ 0.63
TRIM13O60858 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 AC009113.1-201ENST00000570267 2443 ntBASIC19■□□□□ 0.63
TRIM13O60858 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM13O60858 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRIM13O60858 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19■□□□□ 0.63
TRIM13O60858 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TRIM13O60858 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM13O60858 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM13O60858 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM13O60858 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM13O60858 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM13O60858 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.99■□□□□ 0.63
TRIM13O60858 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM13O60858 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM13O60858 AC104417.2-201ENST00000562989 1793 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms