Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
SSSCA1O60232 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 AC027612.3-201ENST00000413684 1047 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SSSCA1O60232 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.79■□□□□ 0.12
SSSCA1O60232 AL031432.3-201ENST00000607698 485 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.79■□□□□ 0.12
SSSCA1O60232 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.79■□□□□ 0.12
SSSCA1O60232 AC141586.3-201ENST00000562166 1838 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSSCA1O60232 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.79■□□□□ 0.12
SSSCA1O60232 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SSSCA1O60232 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 AL133373.2-201ENST00000623187 2828 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.79■□□□□ 0.12
SSSCA1O60232 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.79■□□□□ 0.12
SSSCA1O60232 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.78■□□□□ 0.12
SSSCA1O60232 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSSCA1O60232 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.78■□□□□ 0.12
SSSCA1O60232 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.78■□□□□ 0.12
SSSCA1O60232 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 HLA-G-202ENST00000376815 851 ntBASIC15.78■□□□□ 0.12
SSSCA1O60232 HLA-G-203ENST00000376818 1127 ntBASIC15.78■□□□□ 0.12
SSSCA1O60232 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.78■□□□□ 0.12
SSSCA1O60232 AC131212.1-201ENST00000613771 668 ntBASIC15.78■□□□□ 0.12
SSSCA1O60232 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SSSCA1O60232 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.78■□□□□ 0.12
SSSCA1O60232 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.78■□□□□ 0.12
SSSCA1O60232 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.78■□□□□ 0.12
SSSCA1O60232 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SSSCA1O60232 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SSSCA1O60232 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSSCA1O60232 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
SSSCA1O60232 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SSSCA1O60232 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.77■□□□□ 0.12
SSSCA1O60232 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.77■□□□□ 0.12
SSSCA1O60232 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSSCA1O60232 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSSCA1O60232 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSSCA1O60232 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSSCA1O60232 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSSCA1O60232 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SSSCA1O60232 PCDHB18P-201ENST00000524813 2368 ntBASIC15.77■□□□□ 0.11
SSSCA1O60232 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSSCA1O60232 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
SSSCA1O60232 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSSCA1O60232 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.76■□□□□ 0.11
SSSCA1O60232 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.76■□□□□ 0.11
SSSCA1O60232 AC110285.6-201ENST00000617652 491 ntBASIC15.76■□□□□ 0.11
SSSCA1O60232 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SSSCA1O60232 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.76■□□□□ 0.11
SSSCA1O60232 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSSCA1O60232 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SSSCA1O60232 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.76■□□□□ 0.11
SSSCA1O60232 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
SSSCA1O60232 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.75■□□□□ 0.11
SSSCA1O60232 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SSSCA1O60232 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.75■□□□□ 0.11
SSSCA1O60232 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms