Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PAX4O43316 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX4O43316 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX4O43316 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PAX4O43316 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX4O43316 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
PAX4O43316 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PAX4O43316 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX4O43316 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX4O43316 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX4O43316 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX4O43316 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PAX4O43316 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX4O43316 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX4O43316 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PAX4O43316 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PAX4O43316 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PAX4O43316 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PAX4O43316 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.81□□□□□ -0.2
PAX4O43316 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.81□□□□□ -0.2
PAX4O43316 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.81□□□□□ -0.2
PAX4O43316 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 AC008403.3-201ENST00000598924 454 ntBASIC13.81□□□□□ -0.2
PAX4O43316 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.81□□□□□ -0.2
PAX4O43316 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PAX4O43316 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PAX4O43316 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.81□□□□□ -0.2
PAX4O43316 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 CROCCP1-201ENST00000426910 5675 ntBASIC13.81□□□□□ -0.2
PAX4O43316 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 AFG3L1P-217ENST00000557444 2447 ntBASIC13.81□□□□□ -0.2
PAX4O43316 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX4O43316 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PAX4O43316 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX4O43316 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
PAX4O43316 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PAX4O43316 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.8□□□□□ -0.2
PAX4O43316 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX4O43316 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.8□□□□□ -0.2
PAX4O43316 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX4O43316 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.8□□□□□ -0.2
PAX4O43316 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX4O43316 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 AC006058.3-201ENST00000606217 1069 ntBASIC13.8□□□□□ -0.2
PAX4O43316 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX4O43316 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX4O43316 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms