Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC092368.3-202ENST00000574180 1591 ntBASIC18.07■□□□□ 0.48
AP3D1O14617 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP3D1O14617 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
AP3D1O14617 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
AP3D1O14617 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 AC142086.2-201ENST00000569753 217 ntBASIC18.06■□□□□ 0.48
AP3D1O14617 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.06■□□□□ 0.48
AP3D1O14617 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 AC018553.1-201ENST00000616682 1458 ntBASIC18.06■□□□□ 0.48
AP3D1O14617 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
AP3D1O14617 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3D1O14617 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3D1O14617 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3D1O14617 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
AP3D1O14617 AC124283.5-201ENST00000624661 1809 ntBASIC18.05■□□□□ 0.48
AP3D1O14617 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3D1O14617 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
AP3D1O14617 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3D1O14617 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AP3D1O14617 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3D1O14617 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.05■□□□□ 0.48
AP3D1O14617 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
AP3D1O14617 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3D1O14617 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3D1O14617 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
AP3D1O14617 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
AP3D1O14617 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.04■□□□□ 0.48
AP3D1O14617 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.04■□□□□ 0.48
AP3D1O14617 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.04■□□□□ 0.48
AP3D1O14617 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.04■□□□□ 0.48
AP3D1O14617 HLA-B-256ENST00000639848 1089 ntBASIC18.04■□□□□ 0.48
AP3D1O14617 AC133041.1-202ENST00000642053 222 ntBASIC18.04■□□□□ 0.48
AP3D1O14617 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 AL032819.2-201ENST00000624543 2162 ntBASIC18.04■□□□□ 0.48
AP3D1O14617 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AP3D1O14617 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3D1O14617 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3D1O14617 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms