Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 AC133681.1-201ENST00000465482 601 ntBASIC18.46■□□□□ 0.55
RTCAO00442 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.46■□□□□ 0.55
RTCAO00442 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.46■□□□□ 0.55
RTCAO00442 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RTCAO00442 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RTCAO00442 AC110285.5-201ENST00000611501 352 ntBASIC18.46■□□□□ 0.55
RTCAO00442 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.46■□□□□ 0.55
RTCAO00442 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 SDHAP1-207ENST00000440850 2000 ntBASIC18.45■□□□□ 0.54
RTCAO00442 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.45■□□□□ 0.54
RTCAO00442 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RTCAO00442 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTCAO00442 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RTCAO00442 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.45■□□□□ 0.54
RTCAO00442 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.45■□□□□ 0.54
RTCAO00442 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.45■□□□□ 0.54
RTCAO00442 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RTCAO00442 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RTCAO00442 AC087289.5-201ENST00000586076 3175 ntBASIC18.45■□□□□ 0.54
RTCAO00442 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RTCAO00442 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
RTCAO00442 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 AC104417.2-201ENST00000562989 1793 ntBASIC18.45■□□□□ 0.54
RTCAO00442 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTCAO00442 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RTCAO00442 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.44■□□□□ 0.54
RTCAO00442 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RTCAO00442 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.44■□□□□ 0.54
RTCAO00442 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTCAO00442 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.44■□□□□ 0.54
RTCAO00442 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RTCAO00442 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.44■□□□□ 0.54
RTCAO00442 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.44■□□□□ 0.54
RTCAO00442 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.44■□□□□ 0.54
RTCAO00442 C1QL1P1-201ENST00000568105 661 ntBASIC18.44■□□□□ 0.54
RTCAO00442 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTCAO00442 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
RTCAO00442 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.43■□□□□ 0.54
RTCAO00442 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 KRT16P5-201ENST00000455284 522 ntBASIC18.43■□□□□ 0.54
RTCAO00442 AC098590.1-201ENST00000468126 897 ntBASIC18.43■□□□□ 0.54
RTCAO00442 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.43■□□□□ 0.54
RTCAO00442 AL359736.2-201ENST00000621992 437 ntBASIC18.43■□□□□ 0.54
RTCAO00442 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.43■□□□□ 0.54
RTCAO00442 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.43■□□□□ 0.54
RTCAO00442 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.43■□□□□ 0.54
RTCAO00442 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTCAO00442 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.43■□□□□ 0.54
RTCAO00442 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.42■□□□□ 0.54
RTCAO00442 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms