Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF25A6NGN4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF25A6NGN4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF25A6NGN4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF25A6NGN4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF25A6NGN4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF25A6NGN4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.14■□□□□ 0.5
PRAMEF25A6NGN4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 AC116351.2-201ENST00000606540 1585 ntBASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF25A6NGN4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 RN7SL471P-201ENST00000580476 299 ntBASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 AC018553.1-201ENST00000616682 1458 ntBASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF25A6NGN4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 AC239809.2-201ENST00000415381 517 ntBASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 NEFHP1-201ENST00000412845 2629 ntBASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF25A6NGN4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 C1QBPP2-201ENST00000528754 825 ntBASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 AL023875.1-201ENST00000640777 796 ntBASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF25A6NGN4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms