Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC124283.5-201ENST00000624661 1809 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KRT8P20-201ENST00000423953 1409 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KRT16P6-202ENST00000425692 1426 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KRT8P17-201ENST00000453110 1448 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KRT17P2-201ENST00000300992 1314 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC233702.5-201ENST00000584107 538 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TNXA-203ENST00000507684 2038 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 Z82202.1-201ENST00000623446 1880 ntBASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV4S1A1TA0A5B7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PTBP1P-201ENST00000554374 1601 ntBASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NBPF21P-201ENST00000425093 1451 ntBASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms