Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TCRBV3S1A0A5B6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TCRBV3S1A0A5B6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.14■□□□□ 0.5
TCRBV3S1A0A5B6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 AC116351.2-201ENST00000606540 1585 ntBASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV3S1A0A5B6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.13■□□□□ 0.49
TCRBV3S1A0A5B6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 ANO7L1-203ENST00000602586 1720 ntBASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 AC123595.1-201ENST00000440769 1046 ntBASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 MKRN4P-201ENST00000444706 1521 ntBASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV3S1A0A5B6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV3S1A0A5B6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 SDHAP1-207ENST00000440850 2000 ntBASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 AC007322.4-201ENST00000509611 723 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms