Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ABALON-201ENST00000629058 1903 ntBASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ANO7L1-203ENST00000602586 1720 ntBASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-1A0A0K0K1D8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRBV6-1A0A0K0K1D8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-1A0A0K0K1D8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.46□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC068338.2-201ENST00000563278 1430 ntBASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-1A0A0K0K1D8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SDHAP1-207ENST00000440850 2000 ntBASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PCDHB18P-201ENST00000524813 2368 ntBASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC073592.3-201ENST00000625118 1834 ntBASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms