Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 CDV3P1-201ENST00000471403 739 ntBASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 RBM17P2-201ENST00000616397 1405 ntBASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV1-1A0A0B4J248 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 AC009053.2-201ENST00000563701 2365 ntBASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 TPRG1LP1-201ENST00000598702 760 ntBASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 GNAS-203ENST00000306120 1878 ntBASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 ZNF815P-204ENST00000434898 1737 ntBASIC15.12■□□□□ 0.01
TRAV1-1A0A0B4J248 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 SLC7A5P2-201ENST00000553010 536 ntBASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 MIR4767-201ENST00000582827 78 ntBASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV1-1A0A0B4J248 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 AC141586.5-201ENST00000624546 2050 ntBASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 AC126763.1-201ENST00000552015 2118 ntBASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 MIR572-201ENST00000384983 95 ntBASIC15.1■□□□□ 0.01
TRAV1-1A0A0B4J248 AC079140.4-201ENST00000507448 529 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms