Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 AC138907.5-202ENST00000569484 235 ntBASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 PTBP1P-201ENST00000554374 1601 ntBASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV12-1A0A0B4J245 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV12-1A0A0B4J245 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.58□□□□□ -0.23
TRAV12-1A0A0B4J245 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV12-1A0A0B4J245 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.58□□□□□ -0.23
TRAV12-1A0A0B4J245 SIRPAP1-201ENST00000448467 1770 ntBASIC13.58□□□□□ -0.23
TRAV12-1A0A0B4J245 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 AL512631.2-201ENST00000604634 923 ntBASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 AL031963.3-201ENST00000606441 850 ntBASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 AL356652.1-201ENST00000615962 565 ntBASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV12-1A0A0B4J245 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 AC126544.1-201ENST00000580842 1059 ntBASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 AL162741.1-201ENST00000565563 1558 ntBASIC13.57□□□□□ -0.24
TRAV12-1A0A0B4J245 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms