Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 AC009053.2-201ENST00000563701 2365 ntBASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 AP001160.3-201ENST00000601484 763 ntBASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-2A0A087WT02 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 POU5F1P4-201ENST00000413175 1085 ntBASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 AC138907.5-202ENST00000569484 235 ntBASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 BID-214ENST00000617586 542 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 AC124067.4-201ENST00000519691 2379 ntBASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-2A0A087WT02 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 BICD1-207ENST00000551848 1962 ntBASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-2A0A087WT02 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms