Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 PNMA6B-201ENST00000538162 1200 ntBASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 AL121906.2-201ENST00000621597 723 ntBASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 AC141586.3-201ENST00000562166 1838 ntBASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 AC060766.5-201ENST00000590539 871 ntBASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 AC083880.1-201ENST00000608266 535 ntBASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV27A0A087WT01 AC138932.1-201ENST00000534164 6830 ntBASIC17.52■□□□□ 0.39
TRAV27A0A087WT01 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV27A0A087WT01 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRAV27A0A087WT01 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV27A0A087WT01 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV27A0A087WT01 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 SDHAP1-207ENST00000440850 2000 ntBASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV27A0A087WT01 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV27A0A087WT01 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV27A0A087WT01 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms