Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NF1P1-201ENST00000604105 2645 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC118273.1-201ENST00000525324 3006 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC073539.1-201ENST00000599810 2094 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PPP4R1L-202ENST00000334187 2746 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NEDD1-203ENST00000429527 3366 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 EDNRA-201ENST00000324300 4135 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 EIF4BP6-201ENST00000431936 1828 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 MXRA5Y-201ENST00000420610 8000 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC116456.2-201ENST00000623018 2209 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 MAPK10-346ENST00000641737 2633 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CCDC144CP-202ENST00000433419 5227 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PPIP5K1-207ENST00000396923 5636 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA68B-201ENST00000364518 133 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA9B-201ENST00000384170 133 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SRMP1-201ENST00000398959 885 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL21P65-201ENST00000406094 466 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RHOA-IT1-201ENST00000428083 517 ntTSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC000362.1-201ENST00000433725 425 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC239367.1-201ENST00000439389 936 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AL358176.5-201ENST00000442611 385 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PHKG1P1-201ENST00000442924 614 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AL513523.4-201ENST00000453778 235 ntTSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SL51P-201ENST00000468230 285 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SL824P-201ENST00000470692 297 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AL033384.2-201ENST00000474641 456 ntTSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA21B-201ENST00000516890 136 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC068657.1-201ENST00000520807 306 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 HNRNPA1P76-201ENST00000529475 848 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC008915.1-201ENST00000561624 837 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 TP53TG3GP-201ENST00000567602 334 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR3921-201ENST00000577308 85 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SL383P-201ENST00000581587 294 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR3185-201ENST00000583892 68 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 AC136601.2-201ENST00000604356 474 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SL185P-201ENST00000615150 249 ntBASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 GOLGA8A-202ENST00000432566 4577 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NCAPD3-214ENST00000534548 5061 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms