RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 AEBP2Q6ZN18 517 aaPredicted RBP11.37□□□□□ -0.59
CLCA3P-202ENST00000466454 CHIC1Q5VXU3 224 aa11.17□□□□□ -0.62
CLCA3P-202ENST00000466454 PHF23Q9BUL5 403 aaPredicted RBP10.13□□□□□ -0.79
CLCA3P-202ENST00000466454 SLC24A1O60721 1099 aa9.41□□□□□ -0.9
CLCA3P-202ENST00000466454 SENP3Q9H4L4 574 aaPredicted RBP9.19□□□□□ -0.94
CLCA3P-202ENST00000466454 PLPPR3Q6T4P5 718 aa9.17□□□□□ -0.94
CLCA3P-202ENST00000466454 ADRA2BP18089 450 aa9.05□□□□□ -0.96
CLCA3P-202ENST00000466454 PPP6R1Q9UPN7 881 aa8.93□□□□□ -0.98
CLCA3P-202ENST00000466454 EHMT2Q96KQ7 1210 aa8.83□□□□□ -1
CLCA3P-202ENST00000466454 FOXD1Q16676 465 aa8.76□□□□□ -1.01
CLCA3P-202ENST00000466454 KCNA4P22459 653 aa8.73□□□□□ -1.01
CLCA3P-202ENST00000466454 NISCHQ9Y2I1 1504 aa8.71□□□□□ -1.02
CLCA3P-202ENST00000466454 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
CLCA3P-202ENST00000466454 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
CLCA3P-202ENST00000466454 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
CLCA3P-202ENST00000466454 PIAS4Q8N2W9 510 aaPredicted RBP8.33□□□□□ -1.08
CLCA3P-202ENST00000466454 CSRNP3Q8WYN3 585 aa8.3□□□□□ -1.08
CLCA3P-202ENST00000466454 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
CLCA3P-202ENST00000466454 PPP4R3CPQ6ZMV5 832 aa8.25□□□□□ -1.09
CLCA3P-202ENST00000466454 PRKCSHP14314 528 aaPredicted RBP8.2□□□□□ -1.1
CLCA3P-202ENST00000466454 SLC4A1APQ9BWU0 796 aaKnown RBP8.19□□□□□ -1.1
CLCA3P-202ENST00000466454 ZBTB22O15209 634 aa8.13□□□□□ -1.11
CLCA3P-202ENST00000466454 NPM3O75607 178 aaKnown RBP8.11□□□□□ -1.11
CLCA3P-202ENST00000466454 MAPK8IP2Q13387 824 aaPredicted RBP8.03□□□□□ -1.12
CLCA3P-202ENST00000466454 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
CLCA3P-202ENST00000466454 APLP2Q06481 763 aa7.99□□□□□ -1.13
CLCA3P-202ENST00000466454 ARXQ96QS3 562 aa7.98□□□□□ -1.13
CLCA3P-202ENST00000466454 TAOK2Q9UL54 1235 aa7.89□□□□□ -1.15
CLCA3P-202ENST00000466454 TULP1O00294 542 aaPredicted RBP7.84□□□□□ -1.15
CLCA3P-202ENST00000466454 CNKSR2Q8WXI2 1034 aa7.78□□□□□ -1.16
CLCA3P-202ENST00000466454 TTBK1Q5TCY1 1321 aaPredicted RBP7.77□□□□□ -1.17
CLCA3P-202ENST00000466454 TPRNQ4KMQ1 711 aa7.74□□□□□ -1.17
CLCA3P-202ENST00000466454 PELP1Q8IZL8 1130 aaKnown RBP7.72□□□□□ -1.17
CLCA3P-202ENST00000466454 BCANQ96GW7 911 aa7.72□□□□□ -1.17
CLCA3P-202ENST00000466454 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
CLCA3P-202ENST00000466454 KLHL34Q8N239 644 aa7.68□□□□□ -1.18
CLCA3P-202ENST00000466454 ERICH6Q7L0X2 663 aa7.68□□□□□ -1.18
CLCA3P-202ENST00000466454 PLCB2Q00722 1185 aa7.67□□□□□ -1.18
CLCA3P-202ENST00000466454 FOXD4L1Q9NU39 408 aa7.64□□□□□ -1.19
CLCA3P-202ENST00000466454 SLC4A2P04920 1241 aa7.63□□□□□ -1.19
CLCA3P-202ENST00000466454 MYT1Q01538 1121 aa7.62□□□□□ -1.19
CLCA3P-202ENST00000466454 SCAF1Q9H7N4 1312 aaKnown RBP7.61□□□□□ -1.19
CLCA3P-202ENST00000466454 RANGAP1P46060 587 aaPredicted RBP7.59□□□□□ -1.19
CLCA3P-202ENST00000466454 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
CLCA3P-202ENST00000466454 PODXL2Q9NZ53 605 aa7.57□□□□□ -1.2
CLCA3P-202ENST00000466454 MSH5O43196 834 aa7.56□□□□□ -1.2
CLCA3P-202ENST00000466454 CCDC180Q9P1Z9 1646 aa7.56□□□□□ -1.2
CLCA3P-202ENST00000466454 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
CLCA3P-202ENST00000466454 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
CLCA3P-202ENST00000466454 ATF5Q9Y2D1 282 aaPredicted RBP7.46□□□□□ -1.22
CLCA3P-202ENST00000466454 FKBP8Q14318 412 aa7.46□□□□□ -1.22
CLCA3P-202ENST00000466454 TMEM132AQ24JP5 1023 aa7.45□□□□□ -1.22
CLCA3P-202ENST00000466454 DMRT2Q9Y5R5 561 aa7.44□□□□□ -1.22
CLCA3P-202ENST00000466454 ZCCHC6Q5VYS8 1495 aaKnown RBP7.42□□□□□ -1.22
CLCA3P-202ENST00000466454 KDM2AQ9Y2K7 1162 aa7.42□□□□□ -1.22
CLCA3P-202ENST00000466454 HOXD11P31277 338 aaPredicted RBP7.41□□□□□ -1.22
CLCA3P-202ENST00000466454 EIF5BO60841 1220 aaKnown RBP7.4□□□□□ -1.22
CLCA3P-202ENST00000466454 DCAF8L1A6NGE4 600 aa7.39□□□□□ -1.23
CLCA3P-202ENST00000466454 NPM2Q86SE8 214 aaKnown RBP7.39□□□□□ -1.23
CLCA3P-202ENST00000466454 VSIG10Q8N0Z9 540 aa7.36□□□□□ -1.23
CLCA3P-202ENST00000466454 DCAF1Q9Y4B6 1507 aa7.35□□□□□ -1.23
CLCA3P-202ENST00000466454 FBLN2P98095 1184 aa7.33□□□□□ -1.24
CLCA3P-202ENST00000466454 TRIM26Q12899 539 aaPredicted RBP7.33□□□□□ -1.24
CLCA3P-202ENST00000466454 POTEDQ86YR6 584 aa7.33□□□□□ -1.24
CLCA3P-202ENST00000466454 DNAJC5BQ9UF47 199 aa7.32□□□□□ -1.24
CLCA3P-202ENST00000466454 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
CLCA3P-202ENST00000466454 PLEKHG5O94827 1062 aa7.29□□□□□ -1.24
CLCA3P-202ENST00000466454 HRCP23327 699 aa7.29□□□□□ -1.24
CLCA3P-202ENST00000466454 MYCNP04198 464 aaPredicted RBP7.27□□□□□ -1.25
CLCA3P-202ENST00000466454 LOC105371045A0A1W2PR82 267 aa7.25□□□□□ -1.25
CLCA3P-202ENST00000466454 UBTFP17480 764 aaKnown RBP7.25□□□□□ -1.25
CLCA3P-202ENST00000466454 SUPT5HO00267 1087 aaKnown RBP7.24□□□□□ -1.25
CLCA3P-202ENST00000466454 FBXO3Q9UK99 471 aa7.23□□□□□ -1.25
CLCA3P-202ENST00000466454 U3KPZ7 1027 aaPredicted RBP7.19□□□□□ -1.26
CLCA3P-202ENST00000466454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLCA3P-202ENST00000466454 MYO15BQ96JP2 1530 aa7.16□□□□□ -1.26
CLCA3P-202ENST00000466454 ATXN8OSP0DMR3 200 aa7.09□□□□□ -1.27
CLCA3P-202ENST00000466454 MKRN4PQ13434 485 aaPredicted RBP7.05□□□□□ -1.28
CLCA3P-202ENST00000466454 SPINK5Q9NQ38 1064 aaPredicted RBP7.04□□□□□ -1.28
CLCA3P-202ENST00000466454 DCAF8L2P0C7V8 631 aa7.03□□□□□ -1.28
CLCA3P-202ENST00000466454 ABCC9O60706 1549 aa7.02□□□□□ -1.28
CLCA3P-202ENST00000466454 SHROOM4Q9ULL8 1493 aa7.01□□□□□ -1.29
CLCA3P-202ENST00000466454 ZNF219Q9P2Y4 722 aaPredicted RBP7□□□□□ -1.29
CLCA3P-202ENST00000466454 IGSF3O75054 1194 aa6.99□□□□□ -1.29
CLCA3P-202ENST00000466454 TSHZ2Q9NRE2 1034 aa6.98□□□□□ -1.29
CLCA3P-202ENST00000466454 TRHP20396 242 aaPredicted RBP6.97□□□□□ -1.29
CLCA3P-202ENST00000466454 NPM1P06748 294 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLCA3P-202ENST00000466454 CHMP4AQ9BY43 222 aa6.96□□□□□ -1.3
CLCA3P-202ENST00000466454 PAXIP1Q6ZW49 1069 aaPredicted RBP6.95□□□□□ -1.3
CLCA3P-202ENST00000466454 SAMD1Q6SPF0 538 aaPredicted RBP6.95□□□□□ -1.3
CLCA3P-202ENST00000466454 SPDYE4A6NLX3 237 aa6.94□□□□□ -1.3
CLCA3P-202ENST00000466454 PKD2Q13563 968 aa6.93□□□□□ -1.3
CLCA3P-202ENST00000466454 IFNLR1Q8IU57 520 aaPredicted RBP6.92□□□□□ -1.3
CLCA3P-202ENST00000466454 CFAP44Q96MT7 982 aa6.92□□□□□ -1.3
CLCA3P-202ENST00000466454 POLA2Q14181 598 aa6.91□□□□□ -1.3
CLCA3P-202ENST00000466454 ABCB7O75027 752 aa6.9□□□□□ -1.3
CLCA3P-202ENST00000466454 NBR1Q14596 966 aa6.9□□□□□ -1.31
CLCA3P-202ENST00000466454 PDIA4P13667 645 aaKnown RBP6.89□□□□□ -1.31
CLCA3P-202ENST00000466454 DNAJC5Q9H3Z4 198 aa6.89□□□□□ -1.31
CLCA3P-202ENST00000466454 NACADO15069 1562 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms