Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC022164.1-201ENST00000568767 2673 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZC3H12C-203ENST00000528673 2931 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CUBNP1-201ENST00000412710 1790 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC011379.1-201ENST00000508713 3025 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01109-201ENST00000603837 3081 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01163-202ENST00000630252 3086 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TIGIT-206ENST00000486257 3149 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 CCL14-201ENST00000614009 3265 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 GART-203ENST00000381815 3341 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC7A7-202ENST00000397528 2098 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AC093616.1-201ENST00000427434 2095 ntBASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 HRH1-204ENST00000438284 2080 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AC068254.2-201ENST00000623938 3577 ntBASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 HAL-203ENST00000541929 3846 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01588-208ENST00000554129 2301 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 C8A-201ENST00000361249 2356 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AC104623.2-202ENST00000623477 4002 ntBASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 TAF8-210ENST00000494547 2402 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 OPTN-201ENST00000263036 2464 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 CLIP4-204ENST00000404424 2480 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ALS2-206ENST00000467448 2677 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 USP54-204ENST00000422491 2777 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 NONO-215ENST00000535149 2882 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 NLRP3-205ENST00000391827 2940 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-4Q9BYR3 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms