Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 NDUFA5P12-201ENST00000503796 343 ntBASIC5.11□□□□□ -1.59
PROM1O43490 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AC005178.1-201ENST00000508392 440 ntBASIC5.11□□□□□ -1.59
PROM1O43490 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 AC010587.2-201ENST00000511727 448 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AC091965.2-201ENST00000512324 613 ntBASIC5.11□□□□□ -1.59
PROM1O43490 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.11□□□□□ -1.59
PROM1O43490 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 AC105185.1-201ENST00000518705 535 ntBASIC5.11□□□□□ -1.59
PROM1O43490 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 AC124293.1-201ENST00000530034 493 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AC068993.1-201ENST00000546724 589 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.11□□□□□ -1.59
PROM1O43490 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.11□□□□□ -1.59
PROM1O43490 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 AC008759.1-201ENST00000589783 983 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AC078795.2-201ENST00000602835 1252 ntBASIC5.11□□□□□ -1.59
PROM1O43490 BNIP3P4-201ENST00000604946 565 ntBASIC5.11□□□□□ -1.59
PROM1O43490 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.11□□□□□ -1.59
PROM1O43490 AP005137.2-201ENST00000609238 400 ntBASIC5.11□□□□□ -1.59
PROM1O43490 MIR8080-201ENST00000622224 89 ntBASIC5.11□□□□□ -1.59
PROM1O43490 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 SAMMSON-227ENST00000642114 1199 ntBASIC5.11□□□□□ -1.59
PROM1O43490 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.11□□□□□ -1.59
PROM1O43490 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PROM1O43490 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AC027514.1-201ENST00000588561 1603 ntBASIC5.11□□□□□ -1.59
PROM1O43490 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
PROM1O43490 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.11□□□□□ -1.59
PROM1O43490 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.1□□□□□ -1.59
PROM1O43490 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.1□□□□□ -1.59
PROM1O43490 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 RNU6-185P-201ENST00000384421 107 ntBASIC5.1□□□□□ -1.59
PROM1O43490 RN7SKP59-201ENST00000410520 314 ntBASIC5.1□□□□□ -1.59
PROM1O43490 RNU6-920P-201ENST00000410926 92 ntBASIC5.1□□□□□ -1.59
PROM1O43490 Y_RNA.625-201ENST00000411256 107 ntBASIC5.1□□□□□ -1.59
PROM1O43490 TCEA1P4-201ENST00000415066 844 ntBASIC5.1□□□□□ -1.59
PROM1O43490 P2RY10P2-201ENST00000416730 913 ntBASIC5.1□□□□□ -1.59
PROM1O43490 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 AC007435.1-201ENST00000421086 415 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 AC006366.1-201ENST00000422002 759 ntBASIC5.1□□□□□ -1.59
PROM1O43490 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.1□□□□□ -1.59
PROM1O43490 ZNF833P-201ENST00000424938 1494 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.1□□□□□ -1.59
PROM1O43490 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.1□□□□□ -1.59
PROM1O43490 USP9YP31-201ENST00000431405 881 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.1□□□□□ -1.59
PROM1O43490 NMNAT1P2-201ENST00000435192 860 ntBASIC5.1□□□□□ -1.59
PROM1O43490 GTF2IP7-202ENST00000436677 309 ntBASIC5.1□□□□□ -1.59
PROM1O43490 HMGB1P16-201ENST00000447155 540 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 FAR2P1-206ENST00000449736 709 ntBASIC5.1□□□□□ -1.59
PROM1O43490 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PROM1O43490 RPL7AP52-201ENST00000458096 790 ntBASIC5.1□□□□□ -1.59
PROM1O43490 MTND5P29-201ENST00000458676 1807 ntBASIC5.1□□□□□ -1.59
PROM1O43490 RPL7P1-201ENST00000468161 747 ntBASIC5.1□□□□□ -1.59
PROM1O43490 RPL7P9-201ENST00000468715 747 ntBASIC5.1□□□□□ -1.59
PROM1O43490 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 IGBP1P4-201ENST00000503202 879 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC111193.1-201ENST00000504097 155 ntBASIC5.1□□□□□ -1.59
PROM1O43490 WBP1LP4-201ENST00000505043 344 ntBASIC5.1□□□□□ -1.59
PROM1O43490 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 GTF2H2B-203ENST00000508065 1432 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC011352.1-201ENST00000512300 793 ntBASIC5.1□□□□□ -1.59
PROM1O43490 NDUFA5P2-201ENST00000519723 344 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.1□□□□□ -1.59
PROM1O43490 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.1□□□□□ -1.59
PROM1O43490 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.1□□□□□ -1.59
PROM1O43490 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 OR10G5P-201ENST00000532733 358 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AP004607.2-201ENST00000533949 322 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PROM1O43490 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms