RNA–Protein interactions for RNA: ENST00000624874.1

PCDHB2-203, Transcript of protocadherin beta 2, humanhuman

TSL 5 BASIC

Gene PCDHB2, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-203ENST00000624874 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
PCDHB2-203ENST00000624874 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
PCDHB2-203ENST00000624874 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
PCDHB2-203ENST00000624874 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
PCDHB2-203ENST00000624874 FOXD1Q16676 465 aa21.03■□□□□ 0.96
PCDHB2-203ENST00000624874 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
PCDHB2-203ENST00000624874 MSH5O43196 834 aa19.8■□□□□ 0.76
PCDHB2-203ENST00000624874 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
PCDHB2-203ENST00000624874 ADRA2BP18089 450 aa19.71■□□□□ 0.75
PCDHB2-203ENST00000624874 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
PCDHB2-203ENST00000624874 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
PCDHB2-203ENST00000624874 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
PCDHB2-203ENST00000624874 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
PCDHB2-203ENST00000624874 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
PCDHB2-203ENST00000624874 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
PCDHB2-203ENST00000624874 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
PCDHB2-203ENST00000624874 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
PCDHB2-203ENST00000624874 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
PCDHB2-203ENST00000624874 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
PCDHB2-203ENST00000624874 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
PCDHB2-203ENST00000624874 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
PCDHB2-203ENST00000624874 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
PCDHB2-203ENST00000624874 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
PCDHB2-203ENST00000624874 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
PCDHB2-203ENST00000624874 KCNA4P22459 653 aa16.72■□□□□ 0.27
PCDHB2-203ENST00000624874 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
PCDHB2-203ENST00000624874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCDHB2-203ENST00000624874 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
PCDHB2-203ENST00000624874 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
PCDHB2-203ENST00000624874 APLP2Q06481 763 aa16.04■□□□□ 0.16
PCDHB2-203ENST00000624874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
PCDHB2-203ENST00000624874 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
PCDHB2-203ENST00000624874 CAPN15O75808 1086 aa15.99■□□□□ 0.15
PCDHB2-203ENST00000624874 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
PCDHB2-203ENST00000624874 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
PCDHB2-203ENST00000624874 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
PCDHB2-203ENST00000624874 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
PCDHB2-203ENST00000624874 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
PCDHB2-203ENST00000624874 DSG3P32926 999 aa15.77■□□□□ 0.12
PCDHB2-203ENST00000624874 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
PCDHB2-203ENST00000624874 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
PCDHB2-203ENST00000624874 ABCB7O75027 752 aa15.55■□□□□ 0.08
PCDHB2-203ENST00000624874 POLA2Q14181 598 aa15.33■□□□□ 0.04
PCDHB2-203ENST00000624874 ZBTB22O15209 634 aa15.29■□□□□ 0.04
PCDHB2-203ENST00000624874 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
PCDHB2-203ENST00000624874 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
PCDHB2-203ENST00000624874 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
PCDHB2-203ENST00000624874 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
PCDHB2-203ENST00000624874 POTEHQ6S545 545 aa14.91□□□□□ -0.02
PCDHB2-203ENST00000624874 FBLN2P98095 1184 aa14.86□□□□□ -0.03
PCDHB2-203ENST00000624874 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
PCDHB2-203ENST00000624874 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
PCDHB2-203ENST00000624874 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
PCDHB2-203ENST00000624874 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
PCDHB2-203ENST00000624874 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
PCDHB2-203ENST00000624874 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
PCDHB2-203ENST00000624874 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
PCDHB2-203ENST00000624874 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
PCDHB2-203ENST00000624874 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
PCDHB2-203ENST00000624874 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
PCDHB2-203ENST00000624874 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
PCDHB2-203ENST00000624874 PITPNM1O00562 1244 aa14.45□□□□□ -0.1
PCDHB2-203ENST00000624874 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
PCDHB2-203ENST00000624874 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
PCDHB2-203ENST00000624874 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
PCDHB2-203ENST00000624874 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
PCDHB2-203ENST00000624874 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHB2-203ENST00000624874 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCDHB2-203ENST00000624874 HAX1O00165 279 aa14.13□□□□□ -0.15
PCDHB2-203ENST00000624874 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
PCDHB2-203ENST00000624874 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
PCDHB2-203ENST00000624874 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
PCDHB2-203ENST00000624874 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
PCDHB2-203ENST00000624874 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
PCDHB2-203ENST00000624874 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
PCDHB2-203ENST00000624874 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
PCDHB2-203ENST00000624874 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
PCDHB2-203ENST00000624874 EVX2Q03828 476 aa13.77□□□□□ -0.21
PCDHB2-203ENST00000624874 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
PCDHB2-203ENST00000624874 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
PCDHB2-203ENST00000624874 PROM2Q8N271 834 aa13.66□□□□□ -0.22
PCDHB2-203ENST00000624874 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHB2-203ENST00000624874 CLCN6P51797 869 aa13.62□□□□□ -0.23
PCDHB2-203ENST00000624874 GABBR2O75899 941 aa13.59□□□□□ -0.23
PCDHB2-203ENST00000624874 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
PCDHB2-203ENST00000624874 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
PCDHB2-203ENST00000624874 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
PCDHB2-203ENST00000624874 FKBP8Q14318 412 aa13.48□□□□□ -0.25
PCDHB2-203ENST00000624874 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
PCDHB2-203ENST00000624874 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
PCDHB2-203ENST00000624874 MIER1Q8N108 512 aa13.42□□□□□ -0.26
PCDHB2-203ENST00000624874 NISCHQ9Y2I1 1504 aa13.4□□□□□ -0.26
PCDHB2-203ENST00000624874 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
PCDHB2-203ENST00000624874 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
PCDHB2-203ENST00000624874 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
PCDHB2-203ENST00000624874 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
PCDHB2-203ENST00000624874 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
PCDHB2-203ENST00000624874 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
PCDHB2-203ENST00000624874 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
PCDHB2-203ENST00000624874 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms