RNA–Protein interactions for RNA: ENST00000286485.12

PSD3-201, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PSD3, Length 6,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-201ENST00000286485 NISCHQ9Y2I1 1504 aa10.09□□□□□ -0.79
PSD3-201ENST00000286485 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
PSD3-201ENST00000286485 DCAF8L2P0C7V8 631 aa8.95□□□□□ -0.98
PSD3-201ENST00000286485 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
PSD3-201ENST00000286485 SUPT5HO00267 1087 aaKnown RBP8.75□□□□□ -1.01
PSD3-201ENST00000286485 CCDC180Q9P1Z9 1646 aa8.71□□□□□ -1.02
PSD3-201ENST00000286485 MYO15BQ96JP2 1530 aa8.56□□□□□ -1.04
PSD3-201ENST00000286485 ZCCHC6Q5VYS8 1495 aaKnown RBP8.52□□□□□ -1.05
PSD3-201ENST00000286485 RB1CC1Q8TDY2 1594 aa8.5□□□□□ -1.05
PSD3-201ENST00000286485 ABCC9O60706 1549 aa8.49□□□□□ -1.05
PSD3-201ENST00000286485 NACADO15069 1562 aa8.49□□□□□ -1.05
PSD3-201ENST00000286485 CHIC1Q5VXU3 224 aa8.37□□□□□ -1.07
PSD3-201ENST00000286485 DCAF1Q9Y4B6 1507 aa8.36□□□□□ -1.07
PSD3-201ENST00000286485 LOC105371045A0A1W2PR82 267 aa8.35□□□□□ -1.07
PSD3-201ENST00000286485 EHMT2Q96KQ7 1210 aa8.3□□□□□ -1.08
PSD3-201ENST00000286485 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
PSD3-201ENST00000286485 PCGF6Q9BYE7 350 aa8.28□□□□□ -1.08
PSD3-201ENST00000286485 SCRIBQ14160 1630 aa8.24□□□□□ -1.09
PSD3-201ENST00000286485 HRCP23327 699 aa8.14□□□□□ -1.11
PSD3-201ENST00000286485 RSF1Q96T23 1441 aaPredicted RBP8.05□□□□□ -1.12
PSD3-201ENST00000286485 CECR2Q9BXF3 1484 aa8.04□□□□□ -1.12
PSD3-201ENST00000286485 APLP2Q06481 763 aa8.03□□□□□ -1.12
PSD3-201ENST00000286485 WIZO95785 1651 aa8.02□□□□□ -1.12
PSD3-201ENST00000286485 PABPN1Q86U42 306 aaKnown RBP eCLIP8□□□□□ -1.13
PSD3-201ENST00000286485 TTBK1Q5TCY1 1321 aaPredicted RBP7.99□□□□□ -1.13
PSD3-201ENST00000286485 TRIM41Q8WV44 630 aa7.98□□□□□ -1.13
PSD3-201ENST00000286485 BAZ1BQ9UIG0 1483 aaKnown RBP7.98□□□□□ -1.13
PSD3-201ENST00000286485 MROH2BQ7Z745 1585 aa7.97□□□□□ -1.13
PSD3-201ENST00000286485 PDS5BQ9NTI5 1447 aa7.97□□□□□ -1.13
PSD3-201ENST00000286485 SMARCA2P51531 1590 aa7.96□□□□□ -1.14
PSD3-201ENST00000286485 NPM1P06748 294 aaKnown RBP eCLIP7.94□□□□□ -1.14
PSD3-201ENST00000286485 ACIN1Q9UKV3 1341 aaKnown RBP7.92□□□□□ -1.14
PSD3-201ENST00000286485 UNC13AQ9UPW8 1703 aa7.91□□□□□ -1.14
PSD3-201ENST00000286485 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
PSD3-201ENST00000286485 TRIM26Q12899 539 aaPredicted RBP7.9□□□□□ -1.14
PSD3-201ENST00000286485 ABCC8Q09428 1581 aa7.9□□□□□ -1.15
PSD3-201ENST00000286485 ERCC6Q03468 1493 aa7.88□□□□□ -1.15
PSD3-201ENST00000286485 CDK11AQ9UQ88 783 aaPredicted RBP7.84□□□□□ -1.16
PSD3-201ENST00000286485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.82□□□□□ -1.16
PSD3-201ENST00000286485 RUSC2Q8N2Y8 1516 aa7.79□□□□□ -1.16
PSD3-201ENST00000286485 EIF4G1Q04637 1599 aaKnown RBP7.79□□□□□ -1.16
PSD3-201ENST00000286485 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
PSD3-201ENST00000286485 NCAPD3P42695 1498 aa7.76□□□□□ -1.17
PSD3-201ENST00000286485 RANGAP1P46060 587 aaPredicted RBP7.76□□□□□ -1.17
PSD3-201ENST00000286485 SOGA1O94964 1423 aa7.75□□□□□ -1.17
PSD3-201ENST00000286485 EEA1Q15075 1411 aa7.74□□□□□ -1.17
PSD3-201ENST00000286485 SMARCA4P51532 1647 aa7.73□□□□□ -1.17
PSD3-201ENST00000286485 CADPSQ9ULU8 1353 aa7.7□□□□□ -1.18
PSD3-201ENST00000286485 CHMP7Q8WUX9 453 aaPredicted RBP7.69□□□□□ -1.18
PSD3-201ENST00000286485 SCAF1Q9H7N4 1312 aaKnown RBP7.68□□□□□ -1.18
PSD3-201ENST00000286485 TOP2AP11388 1531 aaKnown RBP7.68□□□□□ -1.18
PSD3-201ENST00000286485 HMGXB3Q12766 1538 aa7.66□□□□□ -1.18
PSD3-201ENST00000286485 BICRAQ9NZM4 1560 aa7.66□□□□□ -1.18
PSD3-201ENST00000286485 CCER1Q8TC90 406 aaPredicted RBP7.66□□□□□ -1.18
PSD3-201ENST00000286485 ESF1Q9H501 851 aaKnown RBP7.65□□□□□ -1.18
PSD3-201ENST00000286485 UBTFP17480 764 aaKnown RBP7.63□□□□□ -1.19
PSD3-201ENST00000286485 OSCARQ8IYS5 282 aa7.62□□□□□ -1.19
PSD3-201ENST00000286485 CEP162Q5TB80 1403 aa7.62□□□□□ -1.19
PSD3-201ENST00000286485 CARMIL2Q6F5E8 1435 aa7.62□□□□□ -1.19
PSD3-201ENST00000286485 SYNJ1O43426 1573 aa7.62□□□□□ -1.19
PSD3-201ENST00000286485 ATAD2BQ9ULI0 1458 aa7.61□□□□□ -1.19
PSD3-201ENST00000286485 CEP164Q9UPV0 1460 aa7.61□□□□□ -1.19
PSD3-201ENST00000286485 CUX2O14529 1486 aa7.61□□□□□ -1.19
PSD3-201ENST00000286485 WRNQ14191 1432 aaPredicted RBP eCLIP7.6□□□□□ -1.19
PSD3-201ENST00000286485 FBLN2P98095 1184 aa7.6□□□□□ -1.19
PSD3-201ENST00000286485 HNRNPUL2Q1KMD3 747 aaKnown RBP7.59□□□□□ -1.19
PSD3-201ENST00000286485 KIF27Q86VH2 1401 aa7.58□□□□□ -1.2
PSD3-201ENST00000286485 MYT1LQ9UL68 1186 aa7.57□□□□□ -1.2
PSD3-201ENST00000286485 NEUROD1Q13562 356 aa7.56□□□□□ -1.2
PSD3-201ENST00000286485 ZEB1P37275 1124 aaPredicted RBP7.55□□□□□ -1.2
PSD3-201ENST00000286485 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
PSD3-201ENST00000286485 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
PSD3-201ENST00000286485 LAMC3Q9Y6N6 1575 aa7.52□□□□□ -1.21
PSD3-201ENST00000286485 RAPGEF2Q9Y4G8 1499 aa7.52□□□□□ -1.21
PSD3-201ENST00000286485 IFT140Q96RY7 1462 aa7.52□□□□□ -1.21
PSD3-201ENST00000286485 MRC2Q9UBG0 1479 aa7.52□□□□□ -1.21
PSD3-201ENST00000286485 DIEXFQ68CQ4 756 aaKnown RBP7.51□□□□□ -1.21
PSD3-201ENST00000286485 GOLGA3Q08378 1498 aa7.5□□□□□ -1.21
PSD3-201ENST00000286485 TNIKQ9UKE5 1360 aa7.49□□□□□ -1.21
PSD3-201ENST00000286485 HDGFP51858 240 aaKnown RBP7.48□□□□□ -1.21
PSD3-201ENST00000286485 PLEKHD1A6NEE1 506 aa7.47□□□□□ -1.21
PSD3-201ENST00000286485 ATP1B4Q9UN42 357 aaPredicted RBP7.46□□□□□ -1.22
PSD3-201ENST00000286485 GTF3C3Q9Y5Q9 886 aa7.46□□□□□ -1.22
PSD3-201ENST00000286485 KANK4Q5T7N3 995 aaPredicted RBP7.46□□□□□ -1.22
PSD3-201ENST00000286485 RSPH4AQ5TD94 716 aa7.45□□□□□ -1.22
PSD3-201ENST00000286485 FANCD2Q9BXW9 1451 aa7.45□□□□□ -1.22
PSD3-201ENST00000286485 FOXD1Q16676 465 aa7.45□□□□□ -1.22
PSD3-201ENST00000286485 ITGAEP38570 1179 aa7.44□□□□□ -1.22
PSD3-201ENST00000286485 MIER1Q8N108 512 aa7.44□□□□□ -1.22
PSD3-201ENST00000286485 KIF21BO75037 1637 aa7.43□□□□□ -1.22
PSD3-201ENST00000286485 CLIP1P30622 1438 aa7.43□□□□□ -1.22
PSD3-201ENST00000286485 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
PSD3-201ENST00000286485 PEG3Q9GZU2 1588 aa7.43□□□□□ -1.22
PSD3-201ENST00000286485 CC2D2AQ9P2K1 1620 aa7.42□□□□□ -1.22
PSD3-201ENST00000286485 PHLDB1Q86UU1 1377 aa7.41□□□□□ -1.22
PSD3-201ENST00000286485 FHAD1B1AJZ9 1412 aa7.41□□□□□ -1.22
PSD3-201ENST00000286485 CUX1P39880 1505 aa7.41□□□□□ -1.22
PSD3-201ENST00000286485 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
PSD3-201ENST00000286485 CFTRP13569 1480 aa7.41□□□□□ -1.22
PSD3-201ENST00000286485 AEBP2Q6ZN18 517 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms