RNA–Protein interactions for RNA: ENST00000419703.1

FNDC1-IT1-201, FNDC1 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene FNDC1-IT1, Length 516 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-IT1-201ENST00000419703 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
FNDC1-IT1-201ENST00000419703 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
FNDC1-IT1-201ENST00000419703 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
FNDC1-IT1-201ENST00000419703 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
FNDC1-IT1-201ENST00000419703 FOXD1Q16676 465 aa19.32■□□□□ 0.68
FNDC1-IT1-201ENST00000419703 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
FNDC1-IT1-201ENST00000419703 MSH5O43196 834 aa18.2■□□□□ 0.5
FNDC1-IT1-201ENST00000419703 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
FNDC1-IT1-201ENST00000419703 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
FNDC1-IT1-201ENST00000419703 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
FNDC1-IT1-201ENST00000419703 ADRA2BP18089 450 aa17.86■□□□□ 0.45
FNDC1-IT1-201ENST00000419703 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
FNDC1-IT1-201ENST00000419703 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
FNDC1-IT1-201ENST00000419703 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
FNDC1-IT1-201ENST00000419703 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
FNDC1-IT1-201ENST00000419703 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
FNDC1-IT1-201ENST00000419703 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
FNDC1-IT1-201ENST00000419703 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
FNDC1-IT1-201ENST00000419703 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
FNDC1-IT1-201ENST00000419703 CACNB1Q02641 598 aaPredicted RBP15.62■□□□□ 0.09
FNDC1-IT1-201ENST00000419703 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
FNDC1-IT1-201ENST00000419703 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
FNDC1-IT1-201ENST00000419703 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
FNDC1-IT1-201ENST00000419703 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
FNDC1-IT1-201ENST00000419703 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
FNDC1-IT1-201ENST00000419703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
FNDC1-IT1-201ENST00000419703 KCNA4P22459 653 aa14.67□□□□□ -0.06
FNDC1-IT1-201ENST00000419703 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
FNDC1-IT1-201ENST00000419703 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
FNDC1-IT1-201ENST00000419703 CAPN15O75808 1086 aa14.45□□□□□ -0.1
FNDC1-IT1-201ENST00000419703 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
FNDC1-IT1-201ENST00000419703 DSG3P32926 999 aa14.45□□□□□ -0.1
FNDC1-IT1-201ENST00000419703 APLP2Q06481 763 aa14.35□□□□□ -0.11
FNDC1-IT1-201ENST00000419703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
FNDC1-IT1-201ENST00000419703 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
FNDC1-IT1-201ENST00000419703 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
FNDC1-IT1-201ENST00000419703 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
FNDC1-IT1-201ENST00000419703 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
FNDC1-IT1-201ENST00000419703 ABCB7O75027 752 aa14.07□□□□□ -0.16
FNDC1-IT1-201ENST00000419703 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
FNDC1-IT1-201ENST00000419703 POTEHQ6S545 545 aa14.02□□□□□ -0.17
FNDC1-IT1-201ENST00000419703 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
FNDC1-IT1-201ENST00000419703 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
FNDC1-IT1-201ENST00000419703 POLA2Q14181 598 aa13.8□□□□□ -0.2
FNDC1-IT1-201ENST00000419703 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
FNDC1-IT1-201ENST00000419703 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
FNDC1-IT1-201ENST00000419703 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
FNDC1-IT1-201ENST00000419703 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
FNDC1-IT1-201ENST00000419703 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
FNDC1-IT1-201ENST00000419703 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
FNDC1-IT1-201ENST00000419703 ZBTB22O15209 634 aa13.48□□□□□ -0.25
FNDC1-IT1-201ENST00000419703 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
FNDC1-IT1-201ENST00000419703 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
FNDC1-IT1-201ENST00000419703 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
FNDC1-IT1-201ENST00000419703 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 FBLN2P98095 1184 aa13.17□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
FNDC1-IT1-201ENST00000419703 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
FNDC1-IT1-201ENST00000419703 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
FNDC1-IT1-201ENST00000419703 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
FNDC1-IT1-201ENST00000419703 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
FNDC1-IT1-201ENST00000419703 HAX1O00165 279 aa12.95□□□□□ -0.34
FNDC1-IT1-201ENST00000419703 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
FNDC1-IT1-201ENST00000419703 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
FNDC1-IT1-201ENST00000419703 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
FNDC1-IT1-201ENST00000419703 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
FNDC1-IT1-201ENST00000419703 EVX2Q03828 476 aa12.75□□□□□ -0.37
FNDC1-IT1-201ENST00000419703 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
FNDC1-IT1-201ENST00000419703 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
FNDC1-IT1-201ENST00000419703 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
FNDC1-IT1-201ENST00000419703 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
FNDC1-IT1-201ENST00000419703 GABBR2O75899 941 aa12.5□□□□□ -0.41
FNDC1-IT1-201ENST00000419703 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
FNDC1-IT1-201ENST00000419703 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
FNDC1-IT1-201ENST00000419703 CLCN6P51797 869 aa12.42□□□□□ -0.42
FNDC1-IT1-201ENST00000419703 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
FNDC1-IT1-201ENST00000419703 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
FNDC1-IT1-201ENST00000419703 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
FNDC1-IT1-201ENST00000419703 LHX8Q68G74 356 aa12.27□□□□□ -0.45
FNDC1-IT1-201ENST00000419703 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
FNDC1-IT1-201ENST00000419703 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
FNDC1-IT1-201ENST00000419703 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
FNDC1-IT1-201ENST00000419703 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
FNDC1-IT1-201ENST00000419703 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
FNDC1-IT1-201ENST00000419703 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
FNDC1-IT1-201ENST00000419703 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
FNDC1-IT1-201ENST00000419703 PROM2Q8N271 834 aa12.11□□□□□ -0.47
FNDC1-IT1-201ENST00000419703 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
FNDC1-IT1-201ENST00000419703 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
FNDC1-IT1-201ENST00000419703 FKBP8Q14318 412 aa11.9□□□□□ -0.5
FNDC1-IT1-201ENST00000419703 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
FNDC1-IT1-201ENST00000419703 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
FNDC1-IT1-201ENST00000419703 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
FNDC1-IT1-201ENST00000419703 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
FNDC1-IT1-201ENST00000419703 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
FNDC1-IT1-201ENST00000419703 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms