Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC009237.14-201ENST00000609975 1594 ntBASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 HTR7P1-201ENST00000538670 1336 ntBASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.9■□□□□ 0.46
HRH3Q9Y5N1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HRH3Q9Y5N1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
HRH3Q9Y5N1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 AP001271.2-201ENST00000624018 1556 ntBASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 KRT16P5-201ENST00000455284 522 ntBASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 AC133561.5-201ENST00000635547 218 ntBASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HRH3Q9Y5N1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 TMEM179-206ENST00000616017 1645 ntBASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 KRT18P21-201ENST00000515767 1272 ntBASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
HRH3Q9Y5N1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 KRT18P16-201ENST00000510337 1294 ntBASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 AC012306.2-201ENST00000609350 630 ntBASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 AC026471.5-201ENST00000615068 467 ntBASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HRH3Q9Y5N1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms