Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 MIR1224-201ENST00000408193 85 ntBASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB3Q9Y5E6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 AC124283.5-201ENST00000624661 1809 ntBASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB3Q9Y5E6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 KRT8P17-201ENST00000453110 1448 ntBASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB3Q9Y5E6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms