Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 AL033527.3-201ENST00000566366 1196 ntBASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 FER1L4-210ENST00000615531 5998 ntBASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CHTOPQ9Y3Y2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CHTOPQ9Y3Y2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CHTOPQ9Y3Y2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CHTOPQ9Y3Y2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 SLC47A1P1-202ENST00000449666 945 ntBASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CHTOPQ9Y3Y2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHTOPQ9Y3Y2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.87□□□□□ -0.19
CHTOPQ9Y3Y2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms