Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCF3Q9NUQ8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 AL512625.2-201ENST00000417533 625 ntBASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 NCF1B-203ENST00000435988 1254 ntBASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 AL109923.1-201ENST00000618799 583 ntBASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCF3Q9NUQ8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 AC100791.3-201ENST00000617619 330 ntBASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCF3Q9NUQ8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ABCF3Q9NUQ8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ABCF3Q9NUQ8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ABCF3Q9NUQ8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ABCF3Q9NUQ8 AL390961.4-201ENST00000623958 2535 ntBASIC19.64■□□□□ 0.74
ABCF3Q9NUQ8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 AL589743.5-201ENST00000616611 1050 ntBASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 AC105020.6-201ENST00000621523 1217 ntBASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCF3Q9NUQ8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ABCF3Q9NUQ8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.63■□□□□ 0.73
ABCF3Q9NUQ8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCF3Q9NUQ8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ABCF3Q9NUQ8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms