Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 Z82202.1-201ENST00000623446 1880 ntBASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB16Q9NRJ7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 CYP2T1P-201ENST00000432607 1285 ntBASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB16Q9NRJ7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 AC020763.4-201ENST00000623414 4170 ntBASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 AC010980.2-201ENST00000587099 1412 ntBASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB16Q9NRJ7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB16Q9NRJ7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms