Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 AC096733.2-201ENST00000609937 1394 ntBASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 MIR1238-201ENST00000408483 83 ntBASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 FAM207BP-201ENST00000447172 505 ntBASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G1Q9HCP0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 SDHAP1-207ENST00000440850 2000 ntBASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 KRT8P9-201ENST00000558927 1449 ntBASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 AC097488.1-201ENST00000507834 756 ntBASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 AC012306.2-201ENST00000609350 630 ntBASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.29■□□□□ 0.84
CSNK1G1Q9HCP0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 AL390955.1-201ENST00000428694 934 ntBASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 AL158211.5-201ENST00000623583 2518 ntBASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G1Q9HCP0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 AC211429.1-201ENST00000415277 523 ntBASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 AC097493.4-201ENST00000641197 219 ntBASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G1Q9HCP0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.27■□□□□ 0.83
CSNK1G1Q9HCP0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1G1Q9HCP0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1G1Q9HCP0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms