Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 NUDT16P1-203ENST00000513809 620 ntBASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 AL121906.2-201ENST00000621597 723 ntBASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 AP002982.1-201ENST00000492365 877 ntBASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1BQ9H9Y6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
POLR1BQ9H9Y6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 AC020907.5-201ENST00000624372 1936 ntBASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1BQ9H9Y6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AC005521.1-201ENST00000393351 872 ntBASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AL031963.3-201ENST00000606441 850 ntBASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AP000525.1-201ENST00000608286 694 ntBASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AC079598.2-202ENST00000546624 1451 ntBASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 AC124283.5-201ENST00000624661 1809 ntBASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR1BQ9H9Y6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 AIRN-201ENST00000601203 4374 ntBASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms