Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.61■■□□□ 1.21
SH2D4AQ9H788 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.61■■□□□ 1.21
SH2D4AQ9H788 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.61■■□□□ 1.21
SH2D4AQ9H788 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.61■■□□□ 1.21
SH2D4AQ9H788 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 AL445228.2-201ENST00000605589 952 ntBASIC22.6■■□□□ 1.21
SH2D4AQ9H788 FAM87A-204ENST00000613235 858 ntBASIC22.6■■□□□ 1.21
SH2D4AQ9H788 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.6■■□□□ 1.21
SH2D4AQ9H788 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
SH2D4AQ9H788 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 HMGA1P5-201ENST00000412453 271 ntBASIC22.59■■□□□ 1.21
SH2D4AQ9H788 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 AC010203.1-204ENST00000548782 407 ntBASIC22.59■■□□□ 1.21
SH2D4AQ9H788 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH2D4AQ9H788 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 KRT18P35-201ENST00000510488 1269 ntBASIC22.58■■□□□ 1.21
SH2D4AQ9H788 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.58■■□□□ 1.21
SH2D4AQ9H788 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SH2D4AQ9H788 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.58■■□□□ 1.2
SH2D4AQ9H788 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SH2D4AQ9H788 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.58■■□□□ 1.2
SH2D4AQ9H788 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 AC010653.2-201ENST00000623505 997 ntBASIC22.57■■□□□ 1.2
SH2D4AQ9H788 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
SH2D4AQ9H788 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.56■■□□□ 1.2
SH2D4AQ9H788 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms