Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DUX4L16-201ENST00000555130 1264 ntBASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 AC018553.1-201ENST00000616682 1458 ntBASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD4Q9H0A8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD4Q9H0A8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 AL161938.1-201ENST00000569833 2180 ntBASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD4Q9H0A8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms