Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.68□□□□□ -0.06
VGLL1Q99990 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.68□□□□□ -0.06
VGLL1Q99990 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 NEFHP1-201ENST00000412845 2629 ntBASIC14.68□□□□□ -0.06
VGLL1Q99990 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.68□□□□□ -0.06
VGLL1Q99990 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.68□□□□□ -0.06
VGLL1Q99990 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.68□□□□□ -0.06
VGLL1Q99990 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.67□□□□□ -0.06
VGLL1Q99990 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.67□□□□□ -0.06
VGLL1Q99990 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.67□□□□□ -0.06
VGLL1Q99990 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VGLL1Q99990 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VGLL1Q99990 AC093787.1-201ENST00000450396 207 ntBASIC14.67□□□□□ -0.06
VGLL1Q99990 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.67□□□□□ -0.06
VGLL1Q99990 MIR5787-201ENST00000611784 55 ntBASIC14.67□□□□□ -0.06
VGLL1Q99990 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.67□□□□□ -0.06
VGLL1Q99990 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VGLL1Q99990 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.67□□□□□ -0.06
VGLL1Q99990 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.66□□□□□ -0.06
VGLL1Q99990 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.66□□□□□ -0.06
VGLL1Q99990 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.66□□□□□ -0.06
VGLL1Q99990 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.66□□□□□ -0.06
VGLL1Q99990 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.66□□□□□ -0.06
VGLL1Q99990 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.66□□□□□ -0.06
VGLL1Q99990 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.66□□□□□ -0.06
VGLL1Q99990 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.66□□□□□ -0.06
VGLL1Q99990 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VGLL1Q99990 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.65□□□□□ -0.06
VGLL1Q99990 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.65□□□□□ -0.06
VGLL1Q99990 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.65□□□□□ -0.06
VGLL1Q99990 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.65□□□□□ -0.06
VGLL1Q99990 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.65□□□□□ -0.06
VGLL1Q99990 AC005082.1-201ENST00000413042 2259 ntBASIC14.65□□□□□ -0.06
VGLL1Q99990 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 AL161938.1-201ENST00000569833 2180 ntBASIC14.65□□□□□ -0.06
VGLL1Q99990 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VGLL1Q99990 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms