Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF2Q99805 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF2Q99805 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 AL691432.2-201ENST00000607222 2038 ntBASIC17.93■□□□□ 0.46
TM9SF2Q99805 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 RPS2P4-201ENST00000476944 856 ntBASIC17.93■□□□□ 0.46
TM9SF2Q99805 AC233263.1-201ENST00000578059 224 ntBASIC17.93■□□□□ 0.46
TM9SF2Q99805 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF2Q99805 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF2Q99805 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 MIR718-201ENST00000390190 70 ntBASIC17.92■□□□□ 0.46
TM9SF2Q99805 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF2Q99805 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TM9SF2Q99805 AC120498.9-201ENST00000339021 3867 ntBASIC17.92■□□□□ 0.46
TM9SF2Q99805 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms