Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 AL137784.2-201ENST00000607332 1000 ntBASIC16.28■□□□□ 0.2
CLCC1Q96S66 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCC1Q96S66 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCC1Q96S66 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 CNN2P6-201ENST00000439038 900 ntBASIC16.27■□□□□ 0.2
CLCC1Q96S66 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCC1Q96S66 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCC1Q96S66 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
CLCC1Q96S66 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.27■□□□□ 0.19
CLCC1Q96S66 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCC1Q96S66 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCC1Q96S66 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCC1Q96S66 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCC1Q96S66 AC068338.2-201ENST00000563278 1430 ntBASIC16.27■□□□□ 0.19
CLCC1Q96S66 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CLCC1Q96S66 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCC1Q96S66 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.26■□□□□ 0.19
CLCC1Q96S66 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 FER1L4-210ENST00000615531 5998 ntBASIC16.26■□□□□ 0.19
CLCC1Q96S66 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.26■□□□□ 0.19
CLCC1Q96S66 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 AC080038.1-201ENST00000611274 1154 ntBASIC16.26■□□□□ 0.19
CLCC1Q96S66 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 AC231657.2-201ENST00000624556 255 ntBASIC16.26■□□□□ 0.19
CLCC1Q96S66 AC092437.1-201ENST00000624794 1048 ntBASIC16.26■□□□□ 0.19
CLCC1Q96S66 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCC1Q96S66 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCC1Q96S66 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCC1Q96S66 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms