Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GAFA1Q96PS6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GAFA1Q96PS6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.14■□□□□ 0.17
GAFA1Q96PS6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GAFA1Q96PS6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 RPS2P4-201ENST00000476944 856 ntBASIC16.13■□□□□ 0.17
GAFA1Q96PS6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 AL445675.2-201ENST00000620291 557 ntBASIC16.13■□□□□ 0.17
GAFA1Q96PS6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.13■□□□□ 0.17
GAFA1Q96PS6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 KSR1P1-201ENST00000446298 240 ntBASIC16.12■□□□□ 0.17
GAFA1Q96PS6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AL160286.2-201ENST00000567150 934 ntBASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC073195.1-201ENST00000607241 877 ntBASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC007952.6-201ENST00000573168 2673 ntBASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC003957.1-201ENST00000625108 2673 ntBASIC16.12■□□□□ 0.17
GAFA1Q96PS6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 AC116562.4-201ENST00000641316 2276 ntBASIC16.12■□□□□ 0.17
GAFA1Q96PS6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GAFA1Q96PS6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 SDHAP1-207ENST00000440850 2000 ntBASIC16.11■□□□□ 0.17
GAFA1Q96PS6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 RPS2P55-201ENST00000397318 883 ntBASIC16.11■□□□□ 0.17
GAFA1Q96PS6 AC012618.2-201ENST00000428058 849 ntBASIC16.11■□□□□ 0.17
GAFA1Q96PS6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 AC107956.1-201ENST00000494359 873 ntBASIC16.11■□□□□ 0.17
GAFA1Q96PS6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms