Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AC007663.1-201ENST00000438948 1240 ntBASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 KRT18P56-201ENST00000507275 550 ntBASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AP000550.4-202ENST00000639755 178 ntBASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC46A1Q96NT5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 AC092647.4-201ENST00000457211 535 ntBASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC46A1Q96NT5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 AC009947.2-201ENST00000444014 672 ntBASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 KRT126P-201ENST00000549467 1181 ntBASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC46A1Q96NT5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AC092338.2-201ENST00000568827 1415 ntBASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms