Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 KRT8P45-201ENST00000414328 1447 ntBASIC20.62■□□□□ 0.89
ZNF558Q96NG5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 AL671277.2-201ENST00000458060 996 ntBASIC20.62■□□□□ 0.89
ZNF558Q96NG5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 PRSS44-201ENST00000515154 1146 ntBASIC20.62■□□□□ 0.89
ZNF558Q96NG5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 AC008622.2-201ENST00000617006 1229 ntBASIC20.62■□□□□ 0.89
ZNF558Q96NG5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF558Q96NG5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 AC009947.2-201ENST00000444014 672 ntBASIC20.61■□□□□ 0.89
ZNF558Q96NG5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF558Q96NG5 KRT8P11-201ENST00000409686 1436 ntBASIC20.61■□□□□ 0.89
ZNF558Q96NG5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 IER3-202ENST00000376377 1350 ntBASIC20.6■□□□□ 0.89
ZNF558Q96NG5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 AP000523.1-201ENST00000398242 1049 ntBASIC20.6■□□□□ 0.89
ZNF558Q96NG5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZNF558Q96NG5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 KRT18P56-201ENST00000507275 550 ntBASIC20.59■□□□□ 0.89
ZNF558Q96NG5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 AL691432.2-201ENST00000607222 2038 ntBASIC20.59■□□□□ 0.89
ZNF558Q96NG5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.59■□□□□ 0.89
ZNF558Q96NG5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF558Q96NG5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms