Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 RPPH1-201ENST00000516869 333 ntBASIC19.74■□□□□ 0.75
CCDC97Q96F63 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 AC008403.3-201ENST00000598924 454 ntBASIC19.74■□□□□ 0.75
CCDC97Q96F63 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 AC026471.1-201ENST00000564629 3026 ntBASIC19.74■□□□□ 0.75
CCDC97Q96F63 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC97Q96F63 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC97Q96F63 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 C1QBPP2-201ENST00000528754 825 ntBASIC19.73■□□□□ 0.75
CCDC97Q96F63 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC97Q96F63 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC97Q96F63 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.72■□□□□ 0.75
CCDC97Q96F63 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 AC020763.4-201ENST00000623414 4170 ntBASIC19.72■□□□□ 0.75
CCDC97Q96F63 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 CROCCP1-201ENST00000426910 5675 ntBASIC19.72■□□□□ 0.75
CCDC97Q96F63 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC97Q96F63 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC97Q96F63 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 AC125437.2-201ENST00000625180 2167 ntBASIC19.71■□□□□ 0.75
CCDC97Q96F63 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms