Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 RPS2P4-201ENST00000476944 856 ntBASIC19.62■□□□□ 0.73
PTCD2Q8WV60 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 AP006294.2-201ENST00000641667 209 ntBASIC19.61■□□□□ 0.73
PTCD2Q8WV60 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTCD2Q8WV60 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCD2Q8WV60 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 ZNF815P-204ENST00000434898 1737 ntBASIC19.59■□□□□ 0.73
PTCD2Q8WV60 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
PTCD2Q8WV60 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
PTCD2Q8WV60 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCD2Q8WV60 AC110285.5-201ENST00000611501 352 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms