Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 RARRES2P6-201ENST00000567333 442 ntBASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRIML2Q8N7C3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIML2Q8N7C3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 Z82202.1-201ENST00000623446 1880 ntBASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 AC023632.3-201ENST00000521633 145 ntBASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIML2Q8N7C3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 AC026271.2-201ENST00000428091 497 ntBASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 MIR5787-201ENST00000611784 55 ntBASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIML2Q8N7C3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms