Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH20Q8N6Y1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDH20Q8N6Y1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH20Q8N6Y1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH20Q8N6Y1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH20Q8N6Y1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 AL355355.2-201ENST00000442321 338 ntBASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 CR392000.1-201ENST00000624770 1228 ntBASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH20Q8N6Y1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH20Q8N6Y1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 NUDT16P1-203ENST00000513809 620 ntBASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PCDH20Q8N6Y1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH20Q8N6Y1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH20Q8N6Y1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH20Q8N6Y1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH20Q8N6Y1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
PCDH20Q8N6Y1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms