Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 BX088651.1-201ENST00000540551 451 ntBASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 AL031985.4-201ENST00000642138 673 ntBASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 AC009237.14-201ENST00000609975 1594 ntBASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 KRT8P8-201ENST00000434750 1448 ntBASIC19■□□□□ 0.63
TRIM48Q8IWZ4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 LINC01521-201ENST00000504184 1943 ntBASIC19■□□□□ 0.63
TRIM48Q8IWZ4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 AC131212.4-201ENST00000623606 975 ntBASIC19■□□□□ 0.63
TRIM48Q8IWZ4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TRIM48Q8IWZ4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 AL445675.2-201ENST00000620291 557 ntBASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 REXO1L12P-201ENST00000622156 912 ntBASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM48Q8IWZ4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM48Q8IWZ4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM48Q8IWZ4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms