Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 AC018695.7-201ENST00000624587 2492 ntBASIC19.44■□□□□ 0.7
PACS2Q86VP3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 AC137761.2-201ENST00000561729 223 ntBASIC19.44■□□□□ 0.7
PACS2Q86VP3 AC145350.3-201ENST00000569033 163 ntBASIC19.44■□□□□ 0.7
PACS2Q86VP3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PACS2Q86VP3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 AC016769.1-201ENST00000409132 1010 ntBASIC19.43■□□□□ 0.7
PACS2Q86VP3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 AC104187.1-201ENST00000607510 612 ntBASIC19.43■□□□□ 0.7
PACS2Q86VP3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PACS2Q86VP3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS2Q86VP3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 KRT18P61-201ENST00000585825 1298 ntBASIC19.42■□□□□ 0.7
PACS2Q86VP3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS2Q86VP3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS2Q86VP3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.41■□□□□ 0.7
PACS2Q86VP3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS2Q86VP3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms