Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 AL390961.4-201ENST00000623958 2535 ntBASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 AC090164.3-201ENST00000610780 2143 ntBASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 FP475955.4-201ENST00000623131 1990 ntBASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 ZNRF2P3-201ENST00000424200 374 ntBASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 CYP2T1P-201ENST00000432607 1285 ntBASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 AL589743.5-201ENST00000616611 1050 ntBASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 TFP1-202ENST00000475455 1573 ntBASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRTM1Q86UE6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 Z98044.1-201ENST00000632503 1764 ntBASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM1Q86UE6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 AC069236.1-201ENST00000604339 616 ntBASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms