Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
RAPH1Q70E73 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAPH1Q70E73 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 BCL2-203ENST00000589955 5011 ntBASIC19.46■□□□□ 0.71
RAPH1Q70E73 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 AL390719.1-204ENST00000412397 1219 ntBASIC19.46■□□□□ 0.71
RAPH1Q70E73 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.46■□□□□ 0.71
RAPH1Q70E73 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAPH1Q70E73 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 AC116351.2-201ENST00000606540 1585 ntBASIC19.45■□□□□ 0.7
RAPH1Q70E73 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 IKBKGP1-201ENST00000612193 1073 ntBASIC19.45■□□□□ 0.7
RAPH1Q70E73 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.45■□□□□ 0.7
RAPH1Q70E73 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAPH1Q70E73 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 MIR663A-201ENST00000385250 93 ntBASIC19.44■□□□□ 0.7
RAPH1Q70E73 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 AC092437.1-201ENST00000624794 1048 ntBASIC19.44■□□□□ 0.7
RAPH1Q70E73 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAPH1Q70E73 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.44■□□□□ 0.7
RAPH1Q70E73 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.43■□□□□ 0.7
RAPH1Q70E73 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.43■□□□□ 0.7
RAPH1Q70E73 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.43■□□□□ 0.7
RAPH1Q70E73 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.43■□□□□ 0.7
RAPH1Q70E73 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.43■□□□□ 0.7
RAPH1Q70E73 CDCA4P2-201ENST00000441182 718 ntBASIC19.43■□□□□ 0.7
RAPH1Q70E73 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.43■□□□□ 0.7
RAPH1Q70E73 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAPH1Q70E73 AL050303.2-201ENST00000619798 666 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms