Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 MIR5787-201ENST00000611784 55 ntBASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 AC008694.1-202ENST00000636953 945 ntBASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 AC010980.2-201ENST00000587099 1412 ntBASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCHD4Q6ZW05 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 AC022517.1-201ENST00000592429 346 ntBASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 LETM1P2-201ENST00000597330 2178 ntBASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCHD4Q6ZW05 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 AC004911.1-201ENST00000416316 871 ntBASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms