Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF111Q6ZNA4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 AC083880.1-201ENST00000608266 535 ntBASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF111Q6ZNA4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF111Q6ZNA4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF111Q6ZNA4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF111Q6ZNA4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF111Q6ZNA4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF111Q6ZNA4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF111Q6ZNA4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms