Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 MIR1238-201ENST00000408483 83 ntBASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 DGCR10-201ENST00000609839 495 ntBASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDPD4Q6W3E5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 AC087499.1-201ENST00000418141 1075 ntBASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 AC008040.2-201ENST00000461049 708 ntBASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 AC091390.4-202ENST00000476426 537 ntBASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 AC125437.2-201ENST00000625180 2167 ntBASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDPD4Q6W3E5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 ZNF815P-204ENST00000434898 1737 ntBASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 AC211429.1-201ENST00000415277 523 ntBASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 FITM1-202ENST00000559294 800 ntBASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 AP000692.2-201ENST00000608391 879 ntBASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GDPD4Q6W3E5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 TREX1-205ENST00000625293 1783 ntBASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 AL390955.1-201ENST00000428694 934 ntBASIC19.44■□□□□ 0.7
GDPD4Q6W3E5 FAM207BP-201ENST00000447172 505 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms