Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST2H2AA3Q6FI13 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST2H2AA3Q6FI13 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 ESRRAP1-201ENST00000400596 1257 ntBASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 AC004264.1-201ENST00000608354 794 ntBASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 AC005332.7-201ENST00000614046 2005 ntBASIC18.73■□□□□ 0.59
HIST2H2AA3Q6FI13 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 NBPF21P-201ENST00000425093 1451 ntBASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 CD99P1-205ENST00000527459 561 ntBASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 AC069544.1-201ENST00000609399 999 ntBASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 AC007952.6-201ENST00000573168 2673 ntBASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 AC003957.1-201ENST00000625108 2673 ntBASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST2H2AA3Q6FI13 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST2H2AA3Q6FI13 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 ZNF815P-204ENST00000434898 1737 ntBASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 MTDHP1-201ENST00000605323 784 ntBASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HIST2H2AA3Q6FI13 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
HIST2H2AA3Q6FI13 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HIST2H2AA3Q6FI13 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms