Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 AL356488.2-201ENST00000602755 427 ntBASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 MIR7706-201ENST00000613747 67 ntBASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRPF38BQ5VTL8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 MIR1199-201ENST00000621445 119 ntBASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 AC116351.2-201ENST00000606540 1585 ntBASIC21.06■□□□□ 0.96
PRPF38BQ5VTL8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 MED15P5-201ENST00000423150 992 ntBASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 PAWRP1-201ENST00000451083 565 ntBASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF38BQ5VTL8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 Z69720.1-201ENST00000601483 472 ntBASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 AC133561.1-201ENST00000568600 2415 ntBASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 ECEL1P1-201ENST00000373592 1742 ntBASIC21.04■□□□□ 0.96
PRPF38BQ5VTL8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 PTBP1P-201ENST00000554374 1601 ntBASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPF38BQ5VTL8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 AL591424.1-201ENST00000442569 1213 ntBASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms