Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC016405.3-201ENST00000607710 860 ntBASIC18.63■□□□□ 0.57
RNF220Q5VTB9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 CNN2P6-201ENST00000439038 900 ntBASIC18.62■□□□□ 0.57
RNF220Q5VTB9 DUX4L16-201ENST00000555130 1264 ntBASIC18.62■□□□□ 0.57
RNF220Q5VTB9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 TMEM179-206ENST00000616017 1645 ntBASIC18.62■□□□□ 0.57
RNF220Q5VTB9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 DPP3P2-201ENST00000416030 1696 ntBASIC18.62■□□□□ 0.57
RNF220Q5VTB9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 AL139384.1-201ENST00000612143 3047 ntBASIC18.62■□□□□ 0.57
RNF220Q5VTB9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF220Q5VTB9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 MIR5787-201ENST00000611784 55 ntBASIC18.61■□□□□ 0.57
RNF220Q5VTB9 AC100791.3-201ENST00000617619 330 ntBASIC18.61■□□□□ 0.57
RNF220Q5VTB9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF220Q5VTB9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.6■□□□□ 0.57
RNF220Q5VTB9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 RARRES2P4-201ENST00000514074 484 ntBASIC18.6■□□□□ 0.57
RNF220Q5VTB9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.6■□□□□ 0.57
RNF220Q5VTB9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF220Q5VTB9 AC009053.2-201ENST00000563701 2365 ntBASIC18.6■□□□□ 0.57
RNF220Q5VTB9 AC067852.2-201ENST00000590513 2313 ntBASIC18.6■□□□□ 0.57
RNF220Q5VTB9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF220Q5VTB9 AC068338.2-201ENST00000563278 1430 ntBASIC18.59■□□□□ 0.57
RNF220Q5VTB9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF220Q5VTB9 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.59■□□□□ 0.57
RNF220Q5VTB9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF220Q5VTB9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms